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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs71546588 chr6:27971449 GC/G ZFP57 chr6:29640169-29648887:- 0.94 8.9 1.19E-17 Box Plot
THCA rs71546598 chr6:28072877 CCGACCTGGT/C BTN3A2 chr6:26365387-26378548:+ -0.84 -11.91 7.89E-29 Box Plot
THCA rs71546598 chr6:28072877 CCGACCTGGT/C RNF5P1 chr8:38458179-38458718:- 0.72 6.39 3.89E-10 Box Plot
THCA rs71546598 chr6:28072877 CCGACCTGGT/C ZFP57 chr6:29640169-29648887:- 0.94 9.08 2.93E-18 Box Plot
THCA rs71548310 chr6:28183242 T/TTCTGAGGAA BTN3A2 chr6:26365387-26378548:+ -0.51 -8.78 2.91E-17 Box Plot
THCA rs71548310 chr6:28183242 T/TTCTGAGGAA ZFP57 chr6:29640169-29648887:- 0.52 6.19 1.28E-9 Box Plot
THCA rs71548333 chr6:28397676 AAC/A BTN3A2 chr6:26365387-26378548:+ -0.78 -10.86 1.08E-24 Box Plot
THCA rs71548333 chr6:28397676 AAC/A RNF5P1 chr8:38458179-38458718:- 0.67 5.92 5.98E-9 Box Plot
THCA rs71548333 chr6:28397676 AAC/A ZFP57 chr6:29640169-29648887:- 0.92 8.85 1.75E-17 Box Plot
THCA rs71551981 chr7:33047572 AT/A FKBP9L chr7:55748767-55780945:- 0.56 14.3 7.3E-39 Box Plot
THCA rs71557332 chr6:26356853 C/T RNF5P1 chr8:38458179-38458718:- 0.58 6.28 7.82E-10 Box Plot
THCA rs71557334 chr6:26365913 G/T RNF5P1 chr8:38458179-38458718:- 0.58 6.29 7.27E-10 Box Plot
THCA rs71557378 chr6:26903585 T/G RNF5P1 chr8:38458179-38458718:- 0.66 6.12 2.0E-9 Box Plot
THCA rs71557378 chr6:26903585 T/G ZFP57 chr6:29640169-29648887:- 0.77 7.53 2.55E-13 Box Plot
THCA rs71559024 chr6:27352750 G/A ZFP57 chr6:29640169-29648887:- 0.62 6.55 1.52E-10 Box Plot